Gene: AT3G13640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G13640
  • Transcript Identifier AT3G13640.1
  • Gene Type Coding gene
  • Location Chr3 : 4458751-4461323 : negative

Gene Family Information

  • ID HOM05D002395
  • #Genes/#Species 284/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G13640.1
  • symbol ABCE1
  • Alias ATRLI1,RNAse l inhibitor protein 1,RLI1,RNAse l inhibitor protein 1
  • full_name ATP-binding cassette E1
  • uniprot Q9LID6

Descriptions

  • Description RNAse l inhibitor protein 1
  • Computational description RNAse l inhibitor protein 1 (RLI1); CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 2 (TAIR:AT4G19210.1); Has 520439 Blast hits to 315557 proteins in 3815 species: Archae - 10736; Bacteria - 429136; Metazoa - 8543; Fungi - 4048; Plants - 4551; Viruses - 17; Other Eukaryotes - 63408 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006415
IBA
Gene Ontologytranslational termination1
GO:0006413
IBA
Gene Ontologytranslational initiation1
GO:0000054
IBA
Gene Ontologyribosomal subunit export from nucleus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022857
ISS
Gene Ontologytransmembrane transporter activity2
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IBA
Gene OntologyATP binding1
GO:0005524
IEA
InterProATP binding
GO:0043024
IBA
Gene Ontologyribosomal small subunit binding1
GO:0005506
IBA
Gene Ontologyiron ion binding1
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR013283 RLI1
IPR007209 RNase L inhibitor RLI-like, possible metal-binding domain
IPR003439 ABC transporter-like, ATP-binding domain
IPR034348 RLI, domain 1
Mapman id Description
17.6.1 Protein biosynthesis.translation termination.ribosome recycling factor (RLI/ABCE)