Gene: AT3G13220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G13220
  • Transcript Identifier AT3G13220.1
  • Gene Type Coding gene
  • Location Chr3 : 4247968-4250703 : negative

Gene Family Information

  • ID HOM05D000435
  • #Genes/#Species 1184/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G13220.1
  • symbol ABCG26
  • Alias AtABCG26,MSR02,WBC27
  • full_name ATP-binding cassette G26
  • uniprot Q9LK50

Descriptions

  • Description ABC-2 type transporter family protein
  • Computational description WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080110
IMP
Gene Ontologysporopollenin biosynthetic process1
GO:0030638
IMP
Gene Ontologypolyketide metabolic process1
GO:0010152
IMP
Gene Ontologypollen maturation2
GO:0055085
IMP
Gene Ontologytransmembrane transport3
GO:0010584
IMP
Gene Ontologypollen exine formation3
GO:0009555
IMP
Gene Ontologypollen development4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0140359
IEA
Gene OntologyABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0042626
IMP
ISS
Gene OntologyATPase-coupled transmembrane transporter activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005789
IDA
Gene Ontologyendoplasmic reticulum membrane3
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
Gene Ontologyplasma membrane3
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003439 ABC transporter-like, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR043926 ABC transporter family G domain
IPR013525 ABC-2 type transporter
IPR003593 AAA+ ATPase domain
Mapman id Description
21.8.2.1 Cell wall organisation.sporopollenin.export.sporopollenin precursor exporter
24.1.3.2.2 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter