Gene: AT3G13120
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G13120
- Transcript Identifier AT3G13120.3
- Gene Type Coding gene
- Location Chr3 : 4220310-4221526 : negative
Gene Family Information
- ID HOM05D004814
- #Genes/#Species 153/95
- Phylogenetic origin
- ID ORTHO05D005778
- #Genes/#Species 152/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G13120.3
- uniprot Q9LK61
Descriptions
- Description Ribosomal protein S10p/S20e family protein
- Computational description Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848); Has 8443 Blast hits to 8443 proteins in 2902 species: Archae - 264; Bacteria - 5393; Metazoa - 337; Fungi - 182; Plants - 190; Viruses - 0; Other Eukaryotes - 2077 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | Gene Ontology | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IBA | Gene Ontology | structural constituent of ribosome | 1 |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA IEA | GOA Database | chloroplast | |
| GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 3 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009570 | IDA | GOA Database | chloroplast stroma | |
| GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 4 |
| GO:0015935 | IBA | Gene Ontology | small ribosomal subunit | 1 |
| GO:0005739 | IBA | Gene Ontology | mitochondrion | 1 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.2.2.10 | Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS10 |