Gene: AT3G10900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G10900
  • Transcript Identifier AT3G10900.1
  • Gene Type Coding gene
  • Location Chr3 : 3410252-3412070 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G10900.1
  • uniprot Q9SG95

Descriptions

  • Description Glycosyl hydrolase superfamily protein
  • Computational description Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 769 Blast hits to 758 proteins in 191 species: Archae - 23; Bacteria - 211; Metazoa - 0; Fungi - 191; Plants - 306; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071704
IEA
Gene Ontologyorganic substance metabolic process
GO:0071704
IEA
InterProorganic substance metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016985
IEA
GOA Databasemannan endo-1,4-beta-mannosidase activity
GO:0016985
IBA
Gene Ontologymannan endo-1,4-beta-mannosidase activity1
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045053 Mannan endo-1,4-beta-mannosidase-like
IPR001547 Glycoside hydrolase, family 5
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
21.2.3.2.2 Cell wall organisation.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase