Gene: AT3G08800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G08800
  • Transcript Identifier AT3G08800.3
  • Gene Type Coding gene
  • Location Chr3 : 2671148-2674008 : positive

Gene Family Information

  • ID HOM05D006201
  • #Genes/#Species 128/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G08800.3
  • symbol SIEL
  • full_name SHORT-ROOT interacting embryonic lethal
  • uniprot Q8VZA0

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 149 Blast hits to 148 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 3; Plants - 22; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010496
IMP
IBA
Gene Ontologyintercellular transport1 2
GO:0090057
IMP
Gene Ontologyroot radial pattern formation2
GO:0034472
IMP
Gene OntologysnRNA 3'-end processing3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus2
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IDA
IBA
Gene Ontologyendosome1 2
GO:0005938
IEA
GOA Databasecell cortex
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
Mapman id Description
16.3.2.1.3 RNA processing.RNA 3'-end processing.snRNA maturation.DSP snRNA processing complex.component DSP3/SIEL
23.6.1 Protein translocation.plasmodesmata intercellular trafficking.regulatory protein (SIEL)