Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 0.0e+00 1273.5 667 100.0
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 0.0e+00 1109.7 626 93.1
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 1.3e-301 1039.3 626 86.6
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 2.2e-293 1011.9 626 85.1
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 9.1e-287 989.9 626 83.4
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 2.2e-280 968.8 641 80.3
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 3.4e-257 891.7 632 75.6
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 1.7e-256 889.4 650 74.6
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 2.9e-256 888.6 626 76.5
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 9.2e-255 883.6 627 76.6
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 2.1e-254 882.5 627 76.6
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.8e-242 842.8 626 74.1
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 2.6e-209 732.6 633 63.3
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 2.8e-142 510.0 651 45.6
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 5.2e-141 505.8 647 45.6
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 5.4e-138 495.7 636 46.5
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 1.7e-136 490.7 647 46.4
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 3.0e-136 490.0 636 46.2
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 1.5e-135 487.6 645 45.1
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 7.1e-130 468.8 640 45.0
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 1.2e-129 468.0 652 43.6
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 1.2e-129 468.0 638 44.0
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 1.6e-126 457.6 621 44.1
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 1.1e-125 454.9 685 41.0
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 5.8e-124 449.1 672 42.3
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 2.9e-123 446.8 665 41.4
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 3.2e-122 443.4 655 42.4
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 2.1e-121 440.7 661 41.3
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 2.1e-121 440.7 671 41.3
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 2.1e-121 440.7 637 43.0
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.7e-121 440.3 627 43.2
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 3.5e-121 439.9 639 43.8
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 6.0e-121 439.1 627 43.1
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 4.3e-119 433.0 644 41.1
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.6e-118 431.0 538 44.8
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 4.9e-115 419.5 638 40.1
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.6e-113 414.5 604 41.2
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 2.3e-112 410.6 659 40.2
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.1e-111 408.3 633 39.8
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 1.1e-111 408.3 633 40.4
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 5.6e-111 406.0 635 40.3
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 8.1e-110 402.1 673 38.8
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.8e-109 401.0 689 38.2
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 9.0e-109 398.7 481 45.7
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.5e-108 397.9 671 39.3
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 4.5e-108 396.4 637 40.5
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 9.3e-106 388.7 634 39.0
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 9.3e-106 388.7 561 41.4
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 1.2e-105 388.3 661 38.6
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 7.9e-105 385.6 525 42.3
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 1.3e-104 384.8 622 39.7
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 5.1e-104 382.9 622 39.9
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 1.1e-103 381.7 622 39.4
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 9.6e-103 378.6 526 42.0
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 2.1e-102 377.5 654 39.0
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.8e-102 377.1 625 38.7
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 8.2e-102 375.6 541 41.2
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 1.5e-100 371.3 670 37.0
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 2.6e-100 370.5 623 38.8
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 4.5e-100 369.8 649 37.1
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 1.0e-99 368.6 522 41.0
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 3.8e-99 366.7 639 37.7
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 5.5e-98 362.8 561 40.6
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 3.6e-97 360.1 664 36.7
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 3.6e-97 360.1 632 38.0
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 1.0e-96 358.6 564 40.2
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 3.9e-96 356.7 629 37.7
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 1.5e-95 354.8 528 39.6
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 1.5e-95 354.8 637 38.0
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 1.6e-94 351.3 610 36.7
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 1.9e-90 337.8 645 35.5
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 9.4e-90 335.5 619 35.4
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 1.2e-89 335.1 525 39.6
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 5.1e-88 329.7 645 36.4
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 1.1e-87 328.6 635 36.9
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 3.7e-86 323.6 421 45.6
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 5.9e-84 316.2 665 33.2
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 1.0e-83 315.5 665 33.2
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 1.7e-83 314.7 647 35.7
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 1.6e-81 308.1 497 41.0
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 1.5e-74 285.0 373 45.6
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 3.7e-70 270.4 382 44.0
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.1e-69 268.9 487 35.7
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 1.6e-68 265.0 384 42.7
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 2.5e-66 257.7 443 36.8
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 8.0e-65 252.7 355 43.1
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 8.5e-59 232.6 620 30.5
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 4.7e-57 226.9 301 42.9
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.0e-56 225.7 653 29.7
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.4e-55 220.7 507 32.3
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 7.0e-53 213.0 417 36.7
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 9.2e-53 212.6 242 44.6
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.3e-51 208.8 379 36.7
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 1.9e-50 204.9 845 23.7
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 4.6e-44 183.7 373 34.9
RcHm_v2.0_Chr3g0461601 Rosa chinensis HOM05D006201 ORTHO05D007178 2.3e-43 181.4 262 43.1
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 3.6e-41 174.1 287 35.5
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 3.1e-40 171.0 382 29.1
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 7.5e-39 166.4 356 30.6
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 3.3e-34 151.0 267 38.6
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 1.6e-33 148.7 221 38.5
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 6.2e-33 146.7 357 28.3
CAN.G1473.9 Capsicum annuum HOM05D006201 ORTHO05D007178 1.1e-24 119.4 214 38.8
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 8.4e-22 109.8 197 36.0
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 2.4e-16 91.7 121 42.1
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 5.8e-15 87.0 319 24.1
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 1.4e-13 82.4 257 28.8
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.9e-10 72.0 85 44.7
CBR_g8780 Chara braunii HOM05D006201 ORTHO05D007178 2.5e-10 71.6 338 24.0
SEGI_33665 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 4.3e-10 70.9 226 26.1
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 1.4e-08 65.9 82 43.9
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.2e-07 62.8 155 31.6
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 3.8e-06 57.8 74 44.6


User provided reference genes

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