Gene: AT3G07890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G07890
  • Transcript Identifier AT3G07890.1
  • Gene Type Coding gene
  • Location Chr3 : 2516639-2518784 : negative

Gene Family Information

  • ID HOM05D001127
  • #Genes/#Species 547/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G07890.1
  • uniprot Q1H5B2

Descriptions

  • Description Ypt/Rab-GAP domain of gyp1p superfamily protein
  • Computational description Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090630
IBA
Gene Ontologyactivation of GTPase activity1
GO:0006886
IBA
Gene Ontologyintracellular protein transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IBA
Gene OntologyGTPase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035969 Rab-GTPase-TBC domain superfamily
IPR000195 Rab-GTPase-TBC domain
Mapman id Description
22.3.4.2.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activation.RAB-GTPase-activating protein (RAB-GAP)