Gene: AT3G05620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05620
  • Transcript Identifier AT3G05620.1
  • Gene Type Coding gene
  • Location Chr3 : 1629658-1631766 : negative

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05620.1
  • uniprot Q9M9W7

Descriptions

  • Description Plant invertase/pectin methylesterase inhibitor superfamily
  • Computational description Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
Gene Ontologycell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0045490
IEA
Gene Ontologypectin catabolic process
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046910
IBA
Gene Ontologypectinesterase inhibitor activity1
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IBA
Gene Ontologypectinesterase activity1
GO:0030599
IEA
InterPropectinesterase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004857
IEA
GOA Databaseenzyme inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall
GO:0005576
IEA
GOA Databaseextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006501 Pectinesterase inhibitor domain
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR012334 Pectin lyase fold
IPR000070 Pectinesterase, catalytic
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase