Gene: AT3G05610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05610
  • Transcript Identifier AT3G05610.1
  • Gene Type Coding gene
  • Location Chr3 : 1625876-1627976 : negative

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05610.1
  • uniprot Q8GX86

Descriptions

  • Description Plant invertase/pectin methylesterase inhibitor superfamily
  • Computational description Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
Gene Ontologycell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0045490
IEA
Gene Ontologypectin catabolic process
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IBA
Gene Ontologypectinesterase activity1
GO:0030599
IEA
InterPropectinesterase activity
GO:0046910
IBA
Gene Ontologypectinesterase inhibitor activity1
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004857
IEA
GOA Databaseenzyme inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR000070 Pectinesterase, catalytic
IPR006501 Pectinesterase inhibitor domain
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase