Gene: AT3G05410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05410
  • Transcript Identifier AT3G05410.2
  • Gene Type Coding gene
  • Location Chr3 : 1554783-1561456 : positive

Gene Family Information

  • ID HOM05D007200
  • #Genes/#Species 110/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05410.2
  • uniprot F4J7A7

Descriptions

  • Description Photosystem II reaction center PsbP family protein
  • Computational description Photosystem II reaction center PsbP family protein; Has 43 Blast hits to 43 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
  • Computational description Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 355 Blast hits to 355 proteins in 83 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
Gene Ontologyphotosynthesis
GO:0015979
IEA
InterProphotosynthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009654
IEA
Gene Ontologyphotosystem II oxygen evolving complex
GO:0009654
IEA
InterProphotosystem II oxygen evolving complex
GO:0019898
IEA
Gene Ontologyextrinsic component of membrane
GO:0019898
IEA
InterProextrinsic component of membrane
GO:0009536
IEA
GOA Databaseplastid
GO:0009523
IEA
GOA Databasephotosystem II
GO:0009523
IEA
InterProphotosystem II

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002683 PsbP, C-terminal
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich
Mapman id Description
35.1 not assigned.annotated