Gene: AT3G04670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04670
  • Transcript Identifier AT3G04670.1
  • Gene Type Coding gene
  • Location Chr3 : 1266530-1267691 : negative

Gene Family Information

  • ID HOM05D000213
  • #Genes/#Species 1876/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04670.1
  • symbol WRKY39
  • Alias ATWRKY39,WRKY DNA-BINDING PROTEIN 39
  • uniprot Q9SR07

Descriptions

  • Description WRKY DNA-binding protein 39
  • Computational description WRKY DNA-binding protein 39 (WRKY39); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 3371 Blast hits to 2926 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3355; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
Gene Ontologysequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005516
IDA
Gene Ontologycalmodulin binding1
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
IC
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044810 WRKY transcription factor, plant
IPR003657 WRKY domain
IPR018872 Zn-cluster domain
IPR036576 WRKY domain superfamily
Mapman id Description
15.5.22.1 RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY)