Gene: AT3G02470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02470
  • Transcript Identifier AT3G02470.4
  • Gene Type Coding gene
  • Location Chr3 : 510223-511323 : positive

Gene Family Information

  • ID HOM05D000821
  • #Genes/#Species 724/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02470.4
  • symbol SAMDC
  • uniprot Q96286

Descriptions

  • Description S-adenosylmethionine decarboxylase
  • Computational description S-adenosylmethionine decarboxylase (SAMDC); CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
  • Computational description S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006597
IEA
GOA Databasespermine biosynthetic process
GO:0006597
IMP
IBA
Gene Ontologyspermine biosynthetic process1 2
GO:0006597
IEA
InterProspermine biosynthetic process
GO:0008295
IEA
GOA Databasespermidine biosynthetic process
GO:0008295
IMP
IBA
Gene Ontologyspermidine biosynthetic process1 2
GO:0008295
IEA
InterProspermidine biosynthetic process
GO:0006596
IEA
GOA Databasepolyamine biosynthetic process
GO:0006596
TAS
Gene Ontologypolyamine biosynthetic process3
GO:0006557
IEA
Gene OntologyS-adenosylmethioninamine biosynthetic process
GO:0019079
IMP
Gene Ontologyviral genome replication4
GO:0016458
IMP
Gene Ontologygene silencing4
GO:0099402
IMP
Gene Ontologyplant organ development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004014
IEA
GOA Databaseadenosylmethionine decarboxylase activity
GO:0004014
IDA
IBA
Gene Ontologyadenosylmethionine decarboxylase activity2 5
GO:0004014
IEA
InterProadenosylmethionine decarboxylase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
Gene Ontologycytosol2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016067 S-adenosylmethionine decarboxylase, core
IPR001985 S-adenosylmethionine decarboxylase
Mapman id Description
8.2.1 Polyamine metabolism.spermidine biosynthesis.S-adenosyl methionine decarboxylase