Gene: AT3G02460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02460
  • Transcript Identifier AT3G02460.1
  • Gene Type Coding gene
  • Location Chr3 : 506110-508092 : positive

Gene Family Information

  • ID HOM05D005209
  • #Genes/#Species 145/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02460.1
  • uniprot Q8LAF3

Descriptions

  • Description Ypt/Rab-GAP domain of gyp1p superfamily protein
  • Computational description Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: plant adhesion molecule 1 (TAIR:AT5G15930.1); Has 5276 Blast hits to 5263 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 2708; Fungi - 1087; Plants - 526; Viruses - 0; Other Eukaryotes - 955 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
Gene Ontologyintracellular protein transport1
GO:0090630
IBA
Gene Ontologyactivation of GTPase activity1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IBA
Gene OntologyGTPase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000195 Rab-GTPase-TBC domain
IPR035969 Rab-GTPase-TBC domain superfamily
Mapman id Description
22.3.4.2.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activation.RAB-GTPase-activating protein (RAB-GAP)