Gene: AT3G01830

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G01830
  • Transcript Identifier AT3G01830.2
  • Gene Type Coding gene
  • Location Chr3 : 296114-299147 : positive

Gene Family Information

  • ID HOM05D000135
  • #Genes/#Species 2640/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G01830.2
  • uniprot Q9SGI8

Descriptions

  • Description Calcium-binding EF-hand family protein
  • Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 5650 Blast hits to 5606 proteins in 833 species: Archae - 0; Bacteria - 6; Metazoa - 2238; Fungi - 938; Plants - 1778; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink).
  • Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin like 37 (TAIR:AT5G42380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011992 EF-hand domain pair
Mapman id Description
35.1 not assigned.annotated