Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G01830 Arabidopsis thaliana HOM05D000135 ORTHO05D000816 6.1e-60 234.2 138 100.0
Carub.0003s0023 Capsella rubella HOM05D000135 ORTHO05D000816 1.7e-30 136.3 123 61.8
Sp3g00230 Schrenkiella parvula HOM05D000135 ORTHO05D000816 7.2e-29 131.0 114 64.9
AL3G10300 Arabidopsis lyrata HOM05D000135 ORTHO05D000816 3.6e-28 128.6 81 84.0
C03p39360 Brassica napus HOM05D000135 ORTHO05D000816 3.6e-28 128.6 121 62.0
BolC3t16205H Brassica oleracea HOM05D000135 ORTHO05D000816 3.6e-28 128.6 121 62.0
A03p32310 Brassica napus HOM05D000135 ORTHO05D000816 4.7e-28 128.3 121 62.0
BraA03t12401Z Brassica rapa HOM05D000135 ORTHO05D000816 4.7e-28 128.3 121 62.0
Thhalv10021726m.g Eutrema salsugineum HOM05D000135 ORTHO05D000816 2.0e-26 122.9 123 58.5
CARHR075100 Cardamine hirsuta HOM05D000135 ORTHO05D000816 3.4e-26 122.1 126 59.5
C09p74930 Brassica napus HOM05D000135 ORTHO05D000816 9.2e-24 114.0 120 57.5
Aa31LG5G10970 Aethionema arabicum HOM05D000135 ORTHO05D000816 2.7e-15 85.9 78 59.0
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 1.3e-09 67.0 117 41.0
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.7e-09 66.6 115 40.9
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 2.2e-09 66.2 115 38.3
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 1.1e-08 63.9 115 39.1
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.4e-08 63.5 112 38.4
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 2.4e-08 62.8 121 37.2
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 9.2e-08 60.8 115 38.3
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 3.5e-07 58.9 120 34.2
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 6.0e-07 58.2 115 40.0
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 6.0e-07 58.2 123 36.6
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 7.8e-07 57.8 126 35.7
THA.LOC104822416 Tarenaya hassleriana HOM05D000135 ORTHO05D000816 7.8e-07 57.8 111 39.6
Solyc03g005040.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 1.0e-06 57.4 117 35.0
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.3e-06 57.0 118 34.7
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 1.7e-06 56.6 121 32.2
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.7e-06 56.6 127 35.4
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 2.3e-06 56.2 111 39.6
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 2.3e-06 56.2 128 34.4
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 5.1e-06 55.1 115 38.3
Oeu058772.1 Olea europaea HOM05D000135 ORTHO05D000816 5.1e-06 55.1 126 35.7
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.6e-06 54.7 114 38.6
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 8.6e-06 54.3 115 37.4
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 8.6e-06 54.3 109 37.6
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 8.6e-06 54.3 109 37.6


User provided reference genes

Program Settings