Gene: AT2G48110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G48110
- Transcript Identifier AT2G48110.1
- Gene Type Coding gene
- Location Chr2 : 19673370-19679494 : positive
Gene Family Information
- ID HOM05D001484
- #Genes/#Species 428/96
- Phylogenetic origin
- ID ORTHO05D001564
- #Genes/#Species 389/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G48110.1
- symbol REF4
- Alias MED33B
- full_name REDUCED EPIDERMAL FLUORESCENCE 4
- uniprot F4IN69
Descriptions
- Description reduced epidermal fluorescence 4
- Computational description REDUCED EPIDERMAL FLUORESCENCE 4 (REF4); BEST Arabidopsis thaliana protein match is: REF4-related 1 (TAIR:AT3G23590.1); Has 140 Blast hits to 138 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009698 | IEA | GOA Database | phenylpropanoid metabolic process | |
| GO:0009698 | IMP | Gene Ontology | phenylpropanoid metabolic process | 1 |
| GO:2000762 | IEA | GOA Database | regulation of phenylpropanoid metabolic process | |
| GO:2000762 | IGI | Gene Ontology | regulation of phenylpropanoid metabolic process | 2 |
| GO:2000762 | IEA | InterPro | regulation of phenylpropanoid metabolic process |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016592 | IEA | GOA Database | mediator complex | |
| GO:0016592 | IDA | Gene Ontology | mediator complex | 3 |
| GO:0016592 | IEA | InterPro | mediator complex | |
| GO:0016020 | TAS | Gene Ontology | membrane | 1 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039638 | Mediator of RNA polymerase II transcription subunit 33A/B |
| Mapman id | Description |
|---|---|
| 15.3.4.4.3.3 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED5/MED24/MED33 |