Gene: AT2G43620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G43620
  • Transcript Identifier AT2G43620.1
  • Gene Type Coding gene
  • Location Chr2 : 18093954-18095025 : negative

Gene Family Information

  • ID HOM05D000242
  • #Genes/#Species 1731/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G43620.1
  • uniprot O22841

Descriptions

  • Description Chitinase family protein
  • Computational description Chitinase family protein; FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43610.1); Has 3021 Blast hits to 2751 proteins in 582 species: Archae - 0; Bacteria - 707; Metazoa - 34; Fungi - 290; Plants - 1778; Viruses - 39; Other Eukaryotes - 173 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0016998
IEA
Gene Ontologycell wall macromolecule catabolic process
GO:0016998
IEA
InterProcell wall macromolecule catabolic process
GO:0006032
IEA
GOA Databasechitin catabolic process
GO:0006032
IEA
InterProchitin catabolic process
GO:0000272
IEA
GOA Databasepolysaccharide catabolic process
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004568
IEA
GOA Databasechitinase activity
GO:0004568
IBA
Gene Ontologychitinase activity1
GO:0004568
IEA
InterProchitinase activity
GO:0008061
IEA
GOA Databasechitin binding
GO:0008061
IEA
InterProchitin binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast2
GO:0099503
HDA
Gene Ontologysecretory vesicle3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001002 Chitin-binding, type 1
IPR036861 Endochitinase-like superfamily
IPR000726 Glycoside hydrolase, family 19, catalytic
IPR023346 Lysozyme-like domain superfamily
IPR016283 Glycoside hydrolase, family 19
Mapman id Description
35.1 not assigned.annotated