Gene: AT2G43570
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G43570
- Transcript Identifier AT2G43570.1
- Gene Type Coding gene
- Location Chr2 : 18076389-18077435 : negative
Gene Family Information
- ID HOM05D000242
- #Genes/#Species 1731/97
- Phylogenetic origin
- ID ORTHO05D000631
- #Genes/#Species 725/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G43570.1
- symbol CHI
- full_name chitinase%2C putative
- uniprot O24603
Descriptions
- Description chitinase
- Computational description chitinase, putative (CHI); FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2763 Blast hits to 2517 proteins in 507 species: Archae - 0; Bacteria - 569; Metazoa - 35; Fungi - 239; Plants - 1787; Viruses - 9; Other Eukaryotes - 124 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0016998 | IEA | Gene Ontology | cell wall macromolecule catabolic process | |
| GO:0016998 | IEA | InterPro | cell wall macromolecule catabolic process | |
| GO:0006032 | IEA | GOA Database | chitin catabolic process | |
| GO:0006032 | IEA | InterPro | chitin catabolic process | |
| GO:0000272 | IEA | GOA Database | polysaccharide catabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0009627 | IEP | Gene Ontology | systemic acquired resistance | 1 |
| GO:0072722 | IEP | Gene Ontology | response to amitrole | 2 |
| GO:0010272 | IEP | Gene Ontology | response to silver ion | 2 |
| GO:0010150 | IEP | Gene Ontology | leaf senescence | 2 |
| GO:0009615 | IEP | Gene Ontology | response to virus | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004568 | IEA | GOA Database | chitinase activity | |
| GO:0004568 | IBA | Gene Ontology | chitinase activity | 4 |
| GO:0004568 | IEA | InterPro | chitinase activity | |
| GO:0008061 | IEA | GOA Database | chitin binding | |
| GO:0008061 | IEA | InterPro | chitin binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0048046 | IDA | GOA Database | apoplast | |
| GO:0048046 | HDA | Gene Ontology | apoplast | 5 |
| GO:0099503 | HDA | Gene Ontology | secretory vesicle | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |