Gene: AT2G43130

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G43130
  • Transcript Identifier AT2G43130.1
  • Gene Type Coding gene
  • Location Chr2 : 17929899-17930904 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G43130.1
  • symbol ARA4
  • uniprot P28187

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Computational description ARA4; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to heat, inter-Golgi cisterna vesicle-mediated transport; LOCATED IN: trans-Golgi network, Golgi stack, plasma membrane, Golgi-associated vesicle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Rab11-related (InterPro:IPR015595), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 26465 Blast hits to 26427 proteins in 733 species: Archae - 21; Bacteria - 130; Metazoa - 13921; Fungi - 3601; Plants - 3013; Viruses - 20; Other Eukaryotes - 5759 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
Gene Ontologyintracellular protein transport1
GO:0048219
TAS
Gene Ontologyinter-Golgi cisterna vesicle-mediated transport2
GO:0009408
IEP
Gene Ontologyresponse to heat2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IDA
Gene OntologyGTP binding3
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IDA
IBA
Gene OntologyGTPase activity1 3
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005829
IDA
GOA Databasecytosol
GO:0005886
IDA
IEA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005634
ISM
Gene Ontologynucleus
GO:0012505
IBA
Gene Ontologyendomembrane system1
GO:0005802
IDA
Gene Ontologytrans-Golgi network2
GO:0005798
IDA
Gene OntologyGolgi-associated vesicle2
GO:0005795
IDA
Gene OntologyGolgi stack2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase