Gene: AT2G42560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G42560
  • Transcript Identifier AT2G42560.1
  • Gene Type Coding gene
  • Location Chr2 : 17714813-17716821 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT2G42560.1
  • uniprot Q9SIN3

Descriptions

  • Description late embryogenesis abundant domain-containing protein / LEA domain-containing protein
  • Computational description late embryogenesis abundant domain-containing protein / LEA domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: embryonic cell protein 63 (TAIR:AT2G36640.1); Has 15488 Blast hits to 9741 proteins in 1566 species: Archae - 82; Bacteria - 6528; Metazoa - 2119; Fungi - 827; Plants - 2067; Viruses - 138; Other Eukaryotes - 3727 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009631
IDA
Gene Ontologycold acclimation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol2
GO:0019898
IDA
Gene Ontologyextrinsic component of membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004238 Late embryogenesis abundant protein, LEA_4 subgroup
Mapman id Description
35.1 not assigned.annotated