Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G42530 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 2.0e-58 229.2 142 100.0
AL4G41070 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 2.5e-53 212.2 140 93.6
Sp4g24660 Schrenkiella parvula HOM05D010227 ORTHO05D012306 9.7e-45 183.7 140 82.1
Thhalv10017393m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 3.1e-43 178.7 140 80.0
Carub.0004s2498 Capsella rubella HOM05D010227 ORTHO05D012306 2.0e-42 176.0 128 86.7
Carub.0004s2499 Capsella rubella HOM05D010227 ORTHO05D012306 5.0e-41 171.4 140 77.1
A03p23680 Brassica napus HOM05D010227 ORTHO05D012306 5.5e-40 167.9 143 68.5
AL4G41090 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 1.6e-39 166.4 140 77.9
BraA03t11585Z Brassica rapa HOM05D010227 ORTHO05D012306 3.6e-39 165.2 148 65.5
AT2G42540 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 7.9e-39 164.1 140 77.1
C03p28240 Brassica napus HOM05D010227 ORTHO05D012306 1.0e-38 163.7 143 66.4
Thhalv10017395m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 8.2e-36 154.1 140 73.6
CARHR137650 Cardamine hirsuta HOM05D010227 ORTHO05D012306 1.2e-34 150.2 140 72.9
BcaC01g05276 Brassica carinata HOM05D010227 ORTHO05D012306 3.8e-33 145.2 142 71.1
C03p28260 Brassica napus HOM05D010227 ORTHO05D012306 3.8e-33 145.2 142 71.1
BcaB01g03455 Brassica carinata HOM05D010227 ORTHO05D012306 6.5e-33 144.4 106 75.5
CARHR137660 Cardamine hirsuta HOM05D010227 ORTHO05D012306 1.5e-32 143.3 140 70.7
Sp4g24670 Schrenkiella parvula HOM05D010227 ORTHO05D012306 1.9e-32 142.9 140 70.7
BolC3t15199H Brassica oleracea HOM05D010227 ORTHO05D012306 3.2e-32 142.1 104 75.0
Thhalv10017394m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 2.1e-31 139.4 142 67.6
A03p23700 Brassica napus HOM05D010227 ORTHO05D012306 4.0e-30 135.2 110 70.0
BcaC01g05278 Brassica carinata HOM05D010227 ORTHO05D012306 4.4e-29 131.7 143 59.4
BolC3t15197H Brassica oleracea HOM05D010227 ORTHO05D012306 2.5e-24 115.9 143 53.8
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 2.0e-10 69.7 157 36.9
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 4.5e-10 68.6 159 39.0
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 1.0e-09 67.4 156 36.5
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 5.0e-09 65.1 113 45.1
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 3.3e-08 62.4 121 42.1
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 5.6e-08 61.6 121 42.1
Thhalv10004937m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 9.5e-08 60.8 111 44.1
Carub.0005s0301 Capsella rubella HOM05D009656 ORTHO05D011940 3.6e-07 58.9 159 35.2
AL5G13670 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 4.7e-07 58.5 122 41.8
Thhalv10004969m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 6.1e-07 58.2 120 43.3
Sp2g14570 Schrenkiella parvula HOM05D009656 ORTHO05D011940 8.0e-07 57.8 135 40.7
AT2G03850 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 1.0e-06 57.4 124 40.3
BcaC03g17233 Brassica carinata HOM05D009656 ORTHO05D011940 1.0e-06 57.4 115 39.1
C02p51680 Brassica napus HOM05D009656 ORTHO05D011940 1.0e-06 57.4 115 39.1
BolC2t11254H Brassica oleracea HOM05D009656 ORTHO05D011940 1.0e-06 57.4 115 39.1
C02p51700 Brassica napus HOM05D009656 ORTHO05D011940 1.8e-06 56.6 115 39.1
A02p33560 Brassica napus HOM05D009656 ORTHO05D011940 3.0e-06 55.8 114 38.6
BraA02t08377Z Brassica rapa HOM05D009656 ORTHO05D011940 3.0e-06 55.8 114 38.6
AL1G27970 Arabidopsis lyrata HOM05D000133 ORTHO05D005407 6.8e-06 54.7 69 55.1


User provided reference genes

Program Settings