Gene: AT2G42200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G42200
  • Transcript Identifier AT2G42200.1
  • Gene Type Coding gene
  • Location Chr2 : 17587601-17589451 : positive

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G42200.1
  • symbol SPL9
  • Alias AtSPL9
  • uniprot Q700W2

Descriptions

  • Description squamosa promoter binding protein-like 9
  • Computational description squamosa promoter binding protein-like 9 (SPL9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of leaf formation, leaf development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 15 (TAIR:AT3G57920.1); Has 3664 Blast hits to 3108 proteins in 157 species: Archae - 2; Bacteria - 85; Metazoa - 116; Fungi - 125; Plants - 880; Viruses - 2; Other Eukaryotes - 2454 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0010228
IGI
Gene Ontologyvegetative to reproductive phase transition of meristem2
GO:0048366
IDA, IMP
Gene Ontologyleaf development3
GO:2000025
IMP
Gene Ontologyregulation of leaf formation3
GO:0048653
IGI
Gene Ontologyanther development4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036893 SBP domain superfamily
IPR004333 SBP domain
IPR044817 Squamosa promoter-binding-like protein
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)