Gene: AT2G41180
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G41180
- Transcript Identifier AT2G41180.1
- Gene Type Coding gene
- Location Chr2 : 17165242-17165667 : positive
Gene Family Information
- ID HOM05D002974
- #Genes/#Species 232/81
- Phylogenetic origin
- ID ORTHO05D002992
- #Genes/#Species 250/84
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G41180.1
- symbol SIB2
- full_name sigma factor binding protein 2
- uniprot O80669
Descriptions
- Description VQ motif-containing protein
- Computational description VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: sigma factor binding protein 1 (TAIR:AT3G56710.1); Has 49 Blast hits to 49 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051091 | IEA | GOA Database | positive regulation of DNA-binding transcription factor activity | |
| GO:0051091 | IDA | Gene Ontology | positive regulation of DNA-binding transcription factor activity | 1 |
| GO:0051091 | IEA | InterPro | positive regulation of DNA-binding transcription factor activity |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 1 |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISS | Gene Ontology | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 26.9.3.3.2 | External stimuli response.pathogen.defense mechanisms.WRKY33-dependent plant immunity.WRKY33-activating protein (SIB) |