Gene: AT2G40650

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G40650
  • Transcript Identifier AT2G40650.1
  • Gene Type Coding gene
  • Location Chr2 : 16963588-16965596 : negative

Gene Family Information

  • ID HOM05D005421
  • #Genes/#Species 141/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G40650.1
  • uniprot Q8LB54

Descriptions

  • Description PRP38 family protein
  • Computational description PRP38 family protein; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT5G16780.1); Has 71927 Blast hits to 24591 proteins in 1125 species: Archae - 74; Bacteria - 21911; Metazoa - 26638; Fungi - 6334; Plants - 3978; Viruses - 317; Other Eukaryotes - 12675 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0071011
IBA
Gene Ontologyprecatalytic spliceosome1
GO:0005681
IEA
GOA Databasespliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024767 Pre-mRNA-splicing factor 38, C-terminal
IPR005037 Pre-mRNA-splicing factor 38
Mapman id Description
35.1 not assigned.annotated