Gene: AT2G40350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G40350
  • Transcript Identifier AT2G40350.2
  • Gene Type Coding gene
  • Location Chr2 : 16851595-16852684 : negative

Gene Family Information

  • ID HOM05D000661
  • #Genes/#Species 863/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G40350.2
  • uniprot Q9SIZ0

Descriptions

  • Description Integrase-type DNA-binding superfamily protein
  • Computational description Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G40340.1); Has 4959 Blast hits to 4957 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4951; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010286
IEP
Gene Ontologyheat acclimation1
GO:0006950
IBA
Gene Ontologyresponse to stress2
GO:0045893
IBA
Gene Ontologypositive regulation of transcription, DNA-templated2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS, IBA
IEA
Gene OntologyDNA-binding transcription factor activity2 3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding2 4
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)