Gene: AT2G39940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39940
  • Transcript Identifier AT2G39940.1
  • Gene Type Coding gene
  • Location Chr2 : 16672848-16675486 : negative

Gene Family Information

  • ID HOM05D000530
  • #Genes/#Species 1029/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39940.1
  • symbol COI1
  • full_name CORONATINE INSENSITIVE 1
  • uniprot B0ZXW3

Descriptions

  • Description RNI-like superfamily protein
  • Computational description CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031146
IMP
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process1 2
GO:2000022
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid mediated signaling pathway Os01g0853400
GO:0002213
ISO
PLAZA Integrative Orthologydefense response to insect Os01g0853400
GO:0009867
IGI
TAS
Gene Ontologyjasmonic acid mediated signaling pathway3 4
GO:0006952
TAS
Gene Ontologydefense response3
GO:0106167
IMP
Gene Ontologyextracellular ATP signaling5
GO:0048443
IMP
Gene Ontologystamen development6
GO:0048364
IMP
Gene Ontologyroot development6
GO:0009901
IMP
Gene Ontologyanther dehiscence7
GO:0010218
IMP
Gene Ontologyresponse to far red light8
GO:0009909
IMP
Gene Ontologyregulation of flower development8
GO:0009641
IMP
Gene Ontologyshade avoidance8
GO:0050832
IMP
Gene Ontologydefense response to fungus9
GO:0042742
IMP
Gene Ontologydefense response to bacterium10
GO:0010118
IMP
Gene Ontologystomatal movement10
GO:0031348
IMP
Gene Ontologynegative regulation of defense response11
GO:0009753
IMP
Gene Ontologyresponse to jasmonic acid12
GO:0009611
IMP
Gene Ontologyresponse to wounding12
GO:0009625
IMP
Gene Ontologyresponse to insect13
GO:0009861
TAS
Gene Ontologyjasmonic acid and ethylene-dependent systemic resistance14
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process15
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding16

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
IPI
IBA
Gene OntologySCF ubiquitin ligase complex2 12
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR041567 COI1, F-box
IPR041101 Transport inhibitor response 1 domain
Mapman id Description
11.7.2.1.1 Phytohormone action.jasmonic acid.perception and signal transduction.receptor complex.component COI