Gene: AT2G39470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39470
  • Transcript Identifier AT2G39470.1
  • Gene Type Coding gene
  • Location Chr2 : 16476335-16477653 : positive

Gene Family Information

  • ID HOM05D002933
  • #Genes/#Species 235/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39470.1
  • symbol PnsL1
  • Alias PPL2,PsbP-like protein 2
  • full_name Photosynthetic NDH subcomplex L 1
  • uniprot O80634

Descriptions

  • Description PsbP-like protein 2
  • Computational description PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 344 Blast hits to 344 proteins in 81 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
Gene Ontologyphotosynthesis
GO:0015979
IEA
InterProphotosynthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast1
GO:0019898
IEA
Gene Ontologyextrinsic component of membrane
GO:0019898
IEA
InterProextrinsic component of membrane
GO:0009654
IEA
Gene Ontologyphotosystem II oxygen evolving complex
GO:0009654
IEA
InterProphotosystem II oxygen evolving complex
GO:0009523
IEA
GOA Databasephotosystem II
GO:0009523
IEA
InterProphotosystem II
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid2
GO:0016020
IEA
GOA Databasemembrane
GO:0009536
IEA
GOA Databaseplastid
GO:0009535
IDA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane3
GO:0009543
HDA
Gene Ontologychloroplast thylakoid lumen2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich
IPR002683 PsbP, C-terminal
Mapman id Description
1.1.8.1.4.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL1