Gene: AT2G39240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39240
  • Transcript Identifier AT2G39240.2
  • Gene Type Coding gene
  • Location Chr2 : 16384786-16387827 : negative

Gene Family Information

  • ID HOM05D003539
  • #Genes/#Species 193/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39240.2
  • uniprot Q1PEV9

Descriptions

  • Description RNA polymerase I specific transcription initiation factor RRN3 protein
  • Computational description RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity, binding; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT2G34750.1); Has 362 Blast hits to 352 proteins in 169 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 131; Plants - 65; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006361
IBA
Gene Ontologytranscription initiation from RNA polymerase I promoter1
GO:0006413
IEA
GOA Databasetranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001042
IBA
Gene OntologyRNA polymerase I core binding1
GO:0001181
IBA
Gene OntologyRNA polymerase I general transcription initiation factor activity1
GO:0003743
IEA
GOA Databasetranslation initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007991 RNA polymerase I specific transcription initiation factor RRN3
IPR016024 Armadillo-type fold
Mapman id Description
15.2.1 RNA biosynthesis.RNA polymerase I-dependent transcription.basal transcription factor (TFIa/RRN3)