Gene: AT2G38340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38340
  • Transcript Identifier AT2G38340.1
  • Gene Type Coding gene
  • Location Chr2 : 16067447-16068181 : negative

Gene Family Information

  • ID HOM05D000661
  • #Genes/#Species 863/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38340.1
  • symbol DREB19
  • full_name dehydration response element-binding protein 19
  • uniprot O80917

Descriptions

  • Description Integrase-type DNA-binding superfamily protein
  • Computational description Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G40340.1); Has 5061 Blast hits to 5054 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5051; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009738
IEA
GOA Databaseabscisic acid-activated signaling pathway
GO:0045893
IDA
IBA
Gene Ontologypositive regulation of transcription, DNA-templated1 2
GO:0006950
IBA
Gene Ontologyresponse to stress2
GO:0034605
IEP
Gene Ontologycellular response to heat1
GO:0009651
IMP
Gene Ontologyresponse to salt stress1
GO:0009414
IEP
Gene Ontologyresponse to water deprivation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity2 3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding2 4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)