Gene: AT2G38120
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G38120
- Transcript Identifier AT2G38120.1
- Gene Type Coding gene
- Location Chr2 : 15973493-15976792 : positive
Gene Family Information
- ID HOM05D000895
- #Genes/#Species 669/96
- Phylogenetic origin
- ID ORTHO05D000883
- #Genes/#Species 570/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G38120.1
- symbol AUX1
- Alias AtAUX1,MAP1,MODIFIER OF ARF7/NPH4 PHENOTYPES 1,PIR1,WAV5,WAVY ROOTS 5
- full_name AUXIN RESISTANT 1
- uniprot Q96247
Descriptions
- Description Transmembrane amino acid transporter family protein
- Computational description AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010311 | IMP, IGI | Gene Ontology | lateral root formation | 1 2 |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:0006865 | IEA | GOA Database | amino acid transport | |
| GO:0003333 | IEA | GOA Database | amino acid transmembrane transport | |
| GO:0003333 | ISS | Gene Ontology | amino acid transmembrane transport | 3 |
| GO:0060919 | IEA | GOA Database | auxin influx | |
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0009958 | IMP | Gene Ontology | positive gravitropism | 4 |
| GO:0048829 | IMP | Gene Ontology | root cap development | 5 |
| GO:0048765 | IGI | Gene Ontology | root hair cell differentiation | 6 |
| GO:0001736 | IGI | Gene Ontology | establishment of planar polarity | 6 |
| GO:0009926 | TAS | Gene Ontology | auxin polar transport | 7 |
| GO:0009624 | HEP | Gene Ontology | response to nematode | 8 |
| GO:0009733 | NAS | Gene Ontology | response to auxin | |
| GO:0009723 | NAS | Gene Ontology | response to ethylene |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015293 | IEA | GOA Database | symporter activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 9 |
| GO:0010011 | IDA | Gene Ontology | auxin binding | 10 |
| GO:0010328 | IDA | Gene Ontology | auxin influx transmembrane transporter activity | 11 |
| GO:0015171 | ISS | Gene Ontology | amino acid transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA ISM, IBA | Gene Ontology | plasma membrane | 12 13 |
| GO:0005794 | IDA | Gene Ontology | Golgi apparatus | 14 |
| GO:0005768 | IDA | Gene Ontology | endosome | 14 |
| GO:0009986 | IDA | Gene Ontology | cell surface | 15 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013057 | Amino acid transporter, transmembrane domain |
| Mapman id | Description |
|---|---|
| 24.2.3.4.5 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.auxin transporter (AUX/LAX) |