Gene: AT2G31060
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G31060
- Transcript Identifier AT2G31060.3
- Gene Type Coding gene
- Location Chr2 : 13213496-13218544 : negative
Gene Family Information
- ID HOM05D002311
- #Genes/#Species 293/100
- Phylogenetic origin
- ID ORTHO05D006991
- #Genes/#Species 135/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G31060.3
- symbol EMB2785
- full_name EMBRYO DEFECTIVE 2785
- uniprot F4IPW5
Descriptions
- Description elongation factor family protein
- Computational description elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Computational description elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006414 | IEA | GOA Database | translational elongation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IBA IEA | Gene Ontology | GTPase activity | 1 |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | Gene Ontology | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003746 | IEA | GOA Database | translation elongation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005739 | IDA | GOA Database | mitochondrion | |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 2 |
| GO:1990904 | IBA | Gene Ontology | ribonucleoprotein complex | 1 |
| GO:0005829 | IBA | Gene Ontology | cytosol | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000795 | Translational (tr)-type GTP-binding domain |
| IPR042116 | GTP-binding protein TypA/BipA, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR005225 | Small GTP-binding protein domain |
| IPR006298 | GTP-binding protein TypA |
| IPR035647 | EF-G domain III/V-like |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR000640 | Elongation factor EFG, domain V-like |
| IPR035651 | BipA, domain V |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |