Gene: AT2G28740
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G28740
- Transcript Identifier AT2G28740.1
- Gene Type Coding gene
- Location Chr2 : 12329643-12329954 : negative
Gene Family Information
- ID HOM05D000283
- #Genes/#Species 1540/100
- Phylogenetic origin
- ID ORTHO05D000358
- #Genes/#Species 1061/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G28740.1
- symbol HIS4
Descriptions
- Description histone H4
- Computational description histone H4 (HIS4); FUNCTIONS IN: DNA binding; INVOLVED IN: response to water deprivation; LOCATED IN: nucleolus, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072), Histone H4, conserved site (InterPro:IPR019809), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 3178 Blast hits to 3178 proteins in 446 species: Archae - 0; Bacteria - 0; Metazoa - 1790; Fungi - 358; Plants - 490; Viruses - 6; Other Eukaryotes - 534 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009414 | IEP | Gene Ontology | response to water deprivation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | ISS | Gene Ontology | DNA binding | 2 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G59970 |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT1G07660 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G07660 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G07660 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G07660 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G07660 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G07660 |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0000786 | NAS | Gene Ontology | nucleosome | 2 |
| GO:0005777 | HDA | Gene Ontology | peroxisome | 3 |
| GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 4 |
| GO:0005829 | RCA | Gene Ontology | cytosol | 5 |
| GO:0005730 | HDA | Gene Ontology | nucleolus | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.1.4 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H4) |