Gene: AT2G27970
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G27970
- Transcript Identifier AT2G27970.1
- Gene Type Coding gene
- Location Chr2 : 11912460-11913112 : negative
Gene Family Information
- ID HOM05D003918
- #Genes/#Species 178/92
- Phylogenetic origin
- ID ORTHO05D004494
- #Genes/#Species 179/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G27970.1
- symbol CKS2
- uniprot Q9SJJ5
Descriptions
- Description CDK-subunit 2
- Computational description CDK-subunit 2 (CKS2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity; INVOLVED IN: cell cycle; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase, regulatory subunit (InterPro:IPR000789); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase-subunit 1 (TAIR:AT2G27960.1); Has 657 Blast hits to 657 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 305; Fungi - 139; Plants - 105; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007346 | IBA | Gene Ontology | regulation of mitotic cell cycle | 1 |
| GO:0051301 | IEA | GOA Database | cell division | |
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0045737 | IEA | GOA Database | positive regulation of cyclin-dependent protein serine/threonine kinase activity |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016538 | IEA | GOA Database | cyclin-dependent protein serine/threonine kinase regulator activity | |
| GO:0016538 | IEA | InterPro | cyclin-dependent protein serine/threonine kinase regulator activity | |
| GO:0042393 | IBA | Gene Ontology | histone binding | 1 |
| GO:0061575 | IBA | Gene Ontology | cyclin-dependent protein serine/threonine kinase activator activity | 1 |
| GO:0019901 | IBA | Gene Ontology | protein kinase binding | 1 |
| GO:0043130 | IBA | Gene Ontology | ubiquitin binding | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 3 |
| GO:0000307 | IBA | Gene Ontology | cyclin-dependent protein kinase holoenzyme complex | 1 |
| GO:0019005 | IBA | Gene Ontology | SCF ubiquitin ligase complex | 1 |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.1.1.2.8 | Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase complex.scaffolding component CKS |