Gene: AT2G22425
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G22425
- Transcript Identifier AT2G22425.1
- Gene Type Coding gene
- Location Chr2 : 9515079-9515357 : positive
Gene Family Information
- ID HOM05D004390
- #Genes/#Species 163/86
- Phylogenetic origin
- ID ORTHO05D004950
- #Genes/#Species 167/86
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G22425.1
- uniprot Q944J0
Descriptions
- Description Microsomal signal peptidase 12 kDa subunit (SPC12)
- Computational description Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, signal peptidase complex, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT4G40042.1); Has 315 Blast hits to 315 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 81; Plants - 67; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006465 | IEA | GOA Database | signal peptide processing | |
| GO:0006465 | IBA | Gene Ontology | signal peptide processing | 1 |
| GO:0006465 | IEA | InterPro | signal peptide processing | |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0045047 | IBA | Gene Ontology | protein targeting to ER | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005787 | IEA | GOA Database | signal peptidase complex | |
| GO:0005787 | IBA | Gene Ontology | signal peptidase complex | 1 |
| GO:0005787 | IEA | InterPro | signal peptidase complex | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0030176 | IBA | Gene Ontology | integral component of endoplasmic reticulum membrane | 1 |
| GO:0043231 | IEA | GOA Database | intracellular membrane-bounded organelle | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009542 | Signal peptidase complex subunit Spc1/SPCS1 |
| Mapman id | Description |
|---|---|
| 18.11.1.1.2 | Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.component SPCs1 |