Gene: AT2G21270
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G21270
- Transcript Identifier AT2G21270.1
- Gene Type Coding gene
- Location Chr2 : 9108126-9110012 : positive
Gene Family Information
- ID HOM05D002008
- #Genes/#Species 330/99
- Phylogenetic origin
- ID ORTHO05D002054
- #Genes/#Species 323/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G21270.1
- symbol UFD1
- uniprot Q9SJV0
Descriptions
- Description ubiquitin fusion degradation 1
- Computational description ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 702 Blast hits to 700 proteins in 221 species: Archae - 8; Bacteria - 2; Metazoa - 164; Fungi - 209; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | Gene Ontology | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0071712 | IBA | Gene Ontology | ER-associated misfolded protein catabolic process | 1 |
| GO:0030433 | IBA | Gene Ontology | ubiquitin-dependent ERAD pathway | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031593 | IBA | Gene Ontology | polyubiquitin modification-dependent protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0034098 | IBA | Gene Ontology | VCP-NPL4-UFD1 AAA ATPase complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.4.1.2 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.component UFD1 |