Gene: AT2G19260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19260
  • Transcript Identifier AT2G19260.1
  • Gene Type Coding gene
  • Location Chr2 : 8357331-8359931 : positive

Gene Family Information

  • ID HOM05D003999
  • #Genes/#Species 175/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19260.1
  • uniprot F4ISG1

Descriptions

  • Description RING/FYVE/PHD zinc finger superfamily protein
  • Computational description RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, CW-type (InterPro:IPR011124), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1801 Blast hits to 1744 proteins in 174 species: Archae - 2; Bacteria - 8; Metazoa - 1171; Fungi - 140; Plants - 342; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IBA
Gene Ontologynegative regulation of transcription, DNA-templated1
GO:0045944
IBA
Gene Ontologypositive regulation of transcription by RNA polymerase II1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0042393
IBA
Gene Ontologyhistone binding1
GO:0003712
IBA
Gene Ontologytranscription coregulator activity1
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
IPR000949 ELM2 domain
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated