Gene: AT2G17990

General Information

Structural Information

Species Arabidopsis thaliana
Gene Identifier AT2G17990
Transcript Identifier AT2G17990.1
Gene Type Coding gene
Location Chr2 : 7827480-7828596 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001533
#Genes/#Species 415/99
Phylogenetic origin

ID ORTHO05D005122
#Genes/#Species 164/92
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid AT2G17990.1
uniprot Q9SL47

Descriptions

Description polyamine-modulated factor 1-binding protein

Computational description BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink).

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009639	IEA	Gene Ontology	response to red or far red light
GO:0009639	IEA	InterPro	response to red or far red light
GO:0009959	IEA	Gene Ontology	negative gravitropism
GO:0009959	IEA	InterPro	negative gravitropism
GO:0007034	IMP	Gene Ontology	vacuolar transport	1
GO:0080171	IMP	Gene Ontology	lytic vacuole organization	1
GO:0006355	ISO	PLAZA Homology (enrichment)	regulation of transcription, DNA-templated	HOM05D001533

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005886	ISM	Gene Ontology	plasma membrane
GO:0031902	IDA	Gene Ontology	late endosome membrane	1

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR040225	Protein gravitropic in the light 1-like

Mapman id	Description
35.1	not assigned.annotated