Gene: AT2G17580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G17580
  • Transcript Identifier AT2G17580.1
  • Gene Type Coding gene
  • Location Chr2 : 7646507-7650066 : positive

Gene Family Information

  • ID HOM05D002085
  • #Genes/#Species 319/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G17580.1
  • Alias AGS1,ahg2-1 suppressor 1
  • uniprot F4INK3

Descriptions

  • Description Polynucleotide adenylyltransferase family protein
  • Computational description Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097222
IMP
Gene Ontologymitochondrial mRNA polyadenylation1
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA, IMP
ISM
Gene Ontologymitochondrion1
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain
IPR043519 Nucleotidyltransferase superfamily
IPR002646 Poly A polymerase, head domain
Mapman id Description
35.1 not assigned.annotated