Gene: AT2G17360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G17360
  • Transcript Identifier AT2G17360.1
  • Gene Type Coding gene
  • Location Chr2 : 7546598-7548138 : positive

Gene Family Information

  • ID HOM05D001072
  • #Genes/#Species 571/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G17360.1
  • uniprot Q93VH9

Descriptions

  • Description Ribosomal protein S4 (RPS4A) family protein
  • Computational description Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1386 Blast hits to 1386 proteins in 444 species: Archae - 258; Bacteria - 2; Metazoa - 428; Fungi - 183; Plants - 271; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IBA
IEA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
IEA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003723
IEA
InterProRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005739
HDA
Gene Ontologymitochondrion4
GO:0005794
RCA
Gene OntologyGolgi apparatus5
GO:0000325
HDA
Gene Ontologyplant-type vacuole6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014722 Ribosomal protein L2, domain 2
IPR013845 Ribosomal protein S4e, central region
IPR041982 Ribosomal protein S4, KOW domain
IPR036986 RNA-binding S4 domain superfamily
IPR005824 KOW
IPR038237 Ribosomal protein S4e, central domain superfamily
IPR000876 Ribosomal protein S4e
IPR032277 40S ribosomal protein S4, C-terminal domain
IPR002942 RNA-binding S4 domain
IPR013843 Ribosomal protein S4e, N-terminal
Mapman id Description
17.1.3.1.5 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS4