Gene: AT2G13840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G13840
  • Transcript Identifier AT2G13840.1
  • Gene Type Coding gene
  • Location Chr2 : 5788616-5791057 : negative

Gene Family Information

  • ID HOM05D006166
  • #Genes/#Species 129/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G13840.1
  • uniprot Q9ZQI9

Descriptions

  • Description Polymerase/histidinol phosphatase-like protein
  • Computational description Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic
GO:0006259
IEA
GOA DatabaseDNA metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004534
IBA
Gene Ontology5'-3' exoribonuclease activity1
GO:0035312
IBA
Gene Ontology5'-3' exodeoxyribonuclease activity1
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004013 PHP domain
IPR003141 Polymerase/histidinol phosphatase, N-terminal
IPR016195 Polymerase/histidinol phosphatase-like
Mapman id Description
35.1 not assigned.annotated