Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 4.6e-247 857.4 435 100.0
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 2.5e-232 808.5 435 93.1
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 3.6e-231 804.7 435 91.5
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 2.0e-213 745.7 419 86.2
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.3e-212 743.0 414 87.0
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 4.8e-212 741.1 417 87.1
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 6.3e-212 740.7 414 86.7
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 2.9e-209 731.9 413 85.7
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 9.4e-208 726.9 414 85.3
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 5.5e-200 701.0 413 83.1
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 6.1e-199 697.6 412 83.0
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.8e-187 659.4 486 67.9
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 2.6e-173 612.5 424 70.8
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 1.9e-163 579.7 425 65.4
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 7.1e-163 577.8 419 67.1
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 6.0e-162 574.7 417 66.7
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.7e-161 573.2 412 66.0
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 5.1e-161 571.6 423 64.8
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.5e-160 570.1 424 64.9
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 9.5e-160 567.4 414 66.9
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 9.5e-160 567.4 414 66.9
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.1e-159 566.2 415 65.1
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 4.7e-159 565.1 413 65.4
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 6.2e-159 564.7 423 65.0
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 8.1e-159 564.3 422 64.7
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 3.1e-158 562.4 402 66.9
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 4.0e-158 562.0 410 66.1
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 1.2e-157 560.5 427 64.2
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.8e-157 558.1 431 62.9
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 2.2e-156 556.2 424 63.9
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 3.8e-156 555.4 417 65.7
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 8.4e-156 554.3 421 64.4
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.1e-155 553.9 414 64.7
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 1.9e-155 553.1 418 64.6
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 2.4e-155 552.7 418 64.4
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 3.2e-155 552.4 415 64.1
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 4.2e-155 552.0 417 65.2
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 4.2e-155 552.0 422 63.0
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 7.1e-155 551.2 408 64.5
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 7.1e-155 551.2 409 64.3
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 9.2e-155 550.8 412 65.5
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 2.1e-154 549.7 417 65.2
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 2.7e-154 549.3 409 64.1
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.5e-154 548.9 417 65.2
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 4.6e-154 548.5 420 63.6
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 4.6e-154 548.5 417 63.3
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 4.6e-154 548.5 418 64.6
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 6.0e-154 548.1 418 64.1
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.3e-153 546.2 417 64.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.3e-153 546.2 417 64.7
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.3e-153 546.2 420 62.1
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 5.1e-153 545.0 407 64.1
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 2.5e-152 542.7 415 62.7
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 5.6e-152 541.6 401 64.3
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.6e-151 540.0 403 65.5
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.6e-151 540.0 413 64.2
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.4e-150 537.0 417 62.4
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 2.4e-150 536.2 401 64.3
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.5e-149 533.5 415 62.9
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.0e-149 533.1 409 61.6
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 4.4e-149 531.9 416 60.3
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.3e-148 530.4 412 61.7
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.7e-148 530.0 404 63.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 2.9e-148 529.3 409 62.3
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.4e-147 526.9 418 62.4
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 3.2e-147 525.8 411 62.3
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 3.9e-145 518.8 408 61.3
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 3.9e-145 518.8 402 60.2
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 8.7e-145 517.7 411 59.4
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 2.5e-144 516.2 402 59.7
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 5.6e-144 515.0 414 59.9
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 7.3e-144 514.6 403 62.0
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 9.6e-144 514.2 407 61.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 2.8e-143 512.7 407 60.4
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 8.1e-143 511.1 411 59.4
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 3.2e-139 499.2 404 58.9
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 5.4e-139 498.4 371 62.8
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.7e-138 496.1 419 58.2
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.3e-137 493.8 401 59.4
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.5e-136 489.6 427 56.7
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 3.3e-136 489.2 418 57.4
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 9.6e-136 487.6 378 63.0
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 2.1e-135 486.5 405 58.8
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.8e-135 486.1 447 55.3
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.1e-134 484.2 453 53.0
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 4.0e-134 482.3 409 57.7
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 6.9e-134 481.5 298 82.6
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 6.9e-134 481.5 405 58.3
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.9e-132 476.1 326 66.9
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 5.5e-131 471.9 437 54.9
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.7e-130 469.5 442 54.1
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 5.1e-129 465.3 364 61.0
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 3.3e-128 462.6 325 66.2
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.8e-126 456.8 329 62.3
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.0e-124 451.1 345 60.0
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.1e-123 447.6 345 60.0
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.2e-123 446.0 378 55.3
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.4e-118 430.6 425 51.8
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 3.0e-113 412.9 319 62.1
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.4e-110 403.3 290 65.5
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 8.5e-108 394.8 348 54.9
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.2e-106 391.0 362 54.1
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.6e-106 389.4 312 59.0
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 2.6e-104 383.3 277 66.4
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.8e-97 360.5 369 50.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 2.2e-95 353.6 399 49.9
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 3.1e-94 349.7 298 54.7
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 8.5e-92 341.7 406 45.8
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.0e-84 318.2 362 48.1
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.2e-83 313.2 244 60.7
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 4.2e-83 312.8 325 49.5
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 8.0e-82 308.5 300 49.3
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.4e-81 307.8 295 52.9
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 6.1e-74 282.3 215 64.2
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-73 281.6 322 46.6
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 4.1e-70 269.6 325 46.2
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.2e-69 268.1 160 77.5
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 5.9e-69 265.8 180 67.2
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 7.8e-69 265.4 258 50.0
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.7e-55 221.1 231 46.3
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 7.3e-51 205.7 157 61.8
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.6e-43 179.5 143 60.8
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 7.8e-37 159.1 124 59.7
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.0e-36 158.7 275 34.5
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 3.9e-36 156.8 118 59.3
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.4e-30 137.5 117 61.5
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 8.1e-26 122.5 117 59.0
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.8e-18 97.4 57 77.2
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 6.3e-10 69.7 43 72.1
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 1.4e-09 68.6 83 47.0


User provided reference genes

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