Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G13720 Arabidopsis thaliana HOM05D002263 ORTHO05D081494 4.1e-114 414.8 224 100.0
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 6.9e-13 78.6 160 33.8
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 2.0e-12 77.0 160 33.8
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 1.3e-11 74.3 160 30.6
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 1.7e-11 73.9 160 31.2
Ah.10g038760 Amaranthus hybridus HOM05D002263 ORTHO05D003537 2.9e-11 73.2 146 33.6
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 2.9e-11 73.2 160 31.2
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 2.9e-11 73.2 160 31.9
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 5.0e-11 72.4 94 40.4
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 5.0e-11 72.4 160 33.1
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 5.0e-11 72.4 160 33.1
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 5.0e-11 72.4 160 31.9
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 5.0e-11 72.4 160 31.9
SGA_v2.0_scaffold105G30414 Striga asiatica HOM05D002263 ORTHO05D003537 6.5e-11 72.0 99 40.4
Ah.06g183060 Amaranthus hybridus HOM05D002263 ORTHO05D003537 8.5e-11 71.6 146 30.1
Carub.0003s2419 Capsella rubella HOM05D002263 ORTHO05D003537 8.5e-11 71.6 160 35.0
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 8.5e-11 71.6 160 31.2
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 1.1e-10 71.2 160 31.2
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis HOM05D002263 ORTHO05D003537 1.1e-10 71.2 153 33.3
BcaC09g51672 Brassica carinata HOM05D002263 ORTHO05D003537 1.1e-10 71.2 165 32.7
C01p10550 Brassica napus HOM05D002263 ORTHO05D003537 1.1e-10 71.2 160 32.5
BolC1t01018H Brassica oleracea HOM05D002263 ORTHO05D003537 1.1e-10 71.2 160 32.5
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 1.1e-10 71.2 160 31.9
Hma1.2p1_0326F.1_g126210 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 1.1e-10 71.2 97 37.1
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 1.1e-10 71.2 160 31.9
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 1.4e-10 70.9 160 32.5
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 1.4e-10 70.9 160 34.4
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 1.9e-10 70.5 160 30.0
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.9e-10 70.5 160 30.0
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.9e-10 70.5 160 30.0
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.9e-10 70.5 160 30.0
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.9e-10 70.5 160 30.0
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 2.5e-10 70.1 160 33.1
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 2.5e-10 70.1 160 30.6
TAR623G1165 Trochodendron aralioides HOM05D002263 ORTHO05D003537 2.5e-10 70.1 160 30.0
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 3.2e-10 69.7 160 31.2
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 3.2e-10 69.7 145 32.4
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 3.2e-10 69.7 160 29.4
Hma1.2p1_2160F.1_g315580 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 4.2e-10 69.3 160 30.6
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 4.2e-10 69.3 146 30.8
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 5.5e-10 68.9 160 30.0
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 5.5e-10 68.9 160 30.0
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 5.5e-10 68.9 160 30.6
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 5.5e-10 68.9 160 29.4
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 5.5e-10 68.9 160 30.0
Actinidia19405 Actinidia chinensis HOM05D002263 ORTHO05D003537 7.2e-10 68.6 160 30.6
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 7.2e-10 68.6 160 31.2
Sc16g0001930 Simmondsia chinensis HOM05D002263 ORTHO05D003537 9.4e-10 68.2 160 30.0
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 9.4e-10 68.2 160 30.0
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 1.2e-09 67.8 160 31.2
unitig_22.g5326 Utricularia gibba HOM05D002263 ORTHO05D003537 1.2e-09 67.8 160 28.1
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 1.6e-09 67.4 160 30.6
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 1.6e-09 67.4 160 29.4
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 1.6e-09 67.4 94 38.3
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 2.1e-09 67.0 160 28.8
Pp3c18_20260 Physcomitrium patens HOM05D002263 ORTHO05D003537 2.1e-09 67.0 153 32.7
Pp3c18_20261 Physcomitrium patens HOM05D002263 ORTHO05D003537 2.1e-09 67.0 153 32.7
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 2.1e-09 67.0 160 30.0
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 2.7e-09 66.6 162 33.3
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 3.6e-09 66.2 160 30.6
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 3.6e-09 66.2 160 29.4
Mapoly0050s0134 Marchantia polymorpha HOM05D002263 ORTHO05D003537 3.6e-09 66.2 150 32.0
Ah.02g122490 Amaranthus hybridus HOM05D002263 ORTHO05D003537 4.6e-09 65.9 146 31.5
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 4.6e-09 65.9 160 31.2
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 6.1e-09 65.5 94 36.2
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 1.0e-08 64.7 146 32.2
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 1.0e-08 64.7 146 30.1
SMO147G0130 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 1.4e-08 64.3 153 32.0
SMO330G0020 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 1.4e-08 64.3 153 32.0
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 2.3e-08 63.5 160 27.5
Cre01.g009250 Chlamydomonas reinhardtii HOM05D002263 ORTHO05D003537 2.3e-08 63.5 139 31.7
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 3.0e-08 63.2 160 27.5
Pp3c19_3610 Physcomitrium patens HOM05D002263 ORTHO05D003537 3.9e-08 62.8 153 31.4
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 3.9e-08 62.8 160 27.5
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 3.9e-08 62.8 160 27.5
Lj2C383G13 Lonicera japonica HOM05D002263 ORTHO05D003537 5.1e-08 62.4 146 28.8
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 5.1e-08 62.4 160 27.5
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 5.1e-08 62.4 160 27.5
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 5.1e-08 62.4 160 26.9
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 5.1e-08 62.4 160 26.9
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 8.8e-08 61.6 160 26.9
BolC5t34561H Brassica oleracea HOM05D002263 ORTHO05D003537 1.5e-07 60.8 156 29.5
PRCOL_00004802 Prasinoderma coloniale HOM05D002263 ORTHO05D003537 2.6e-07 60.1 94 33.0
SGA_v2.0_scaffold70G23531 Striga asiatica HOM05D002263 ORTHO05D029194 3.3e-07 59.7 82 40.2
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 4.4e-07 59.3 91 36.3
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 7.4e-07 58.5 103 33.0
MCO05G739 Micromonas commoda HOM05D002263 ORTHO05D003537 7.4e-07 58.5 87 33.3
RhsimUnG0044300 Rhododendron simsii HOM05D002263 ORTHO05D003537 9.7e-07 58.2 99 32.3


User provided reference genes

Program Settings