Gene: AT2G07725
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G07725
- Transcript Identifier AT2G07725.1
- Gene Type Coding gene
- Location Chr2 : 3448402-3448959 : positive
Gene Family Information
- ID HOM05D002864
- #Genes/#Species 242/69
- Phylogenetic origin
- ID ORTHO05D008485
- #Genes/#Species 118/49
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G07725.1
- uniprot Q6NMS1
Descriptions
- Description Ribosomal L5P family protein
- Computational description Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 (TAIR:ATMG00210.1); Has 117 Blast hits to 117 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 112; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | TAS, IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IBA | Gene Ontology | RNA binding | 1 |
| GO:0003735 | ISS IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IBA | Gene Ontology | structural constituent of ribosome | 1 |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0022625 | IBA | Gene Ontology | cytosolic large ribosomal subunit | 1 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0016020 | ISO | PLAZA Homology (enrichment) | membrane | HOM05D002864 |
| GO:0005762 | ISO | PLAZA Integrative Orthology | mitochondrial large ribosomal subunit | ATMG00210 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.1.1.6 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL5 |