Gene: AT2G04560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G04560
  • Transcript Identifier AT2G04560.1
  • Gene Type Coding gene
  • Location Chr2 : 1590341-1592667 : negative

Gene Family Information

  • ID HOM05D005800
  • #Genes/#Species 134/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G04560.1
  • symbol LpxB
  • Alias AtLpxB
  • full_name lipid X B
  • uniprot F4IF99

Descriptions

  • Description transferases, transferring glycosyl groups
  • Computational description transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2001289
IMP
Gene Ontologylipid X metabolic process1
GO:0009245
IEA
GOA Databaselipid A biosynthetic process
GO:0009245
IBA
Gene Ontologylipid A biosynthetic process2
GO:0009245
IEA
InterProlipid A biosynthetic process
GO:0006629
IEA
GOA Databaselipid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016757
ISS
Gene Ontologyglycosyltransferase activity
GO:0008915
IEA
GOA Databaselipid-A-disaccharide synthase activity
GO:0008915
IMP
Gene Ontologylipid-A-disaccharide synthase activity1
GO:0008915
IEA
InterProlipid-A-disaccharide synthase activity
GO:0005543
IBA
Gene Ontologyphospholipid binding2
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, IMP
Gene Ontologymitochondrion1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003835 Glycosyl transferase, family 19
Mapman id Description
5.6.4 Lipid metabolism.lipid A biosynthesis.lipid-A-disaccharide synthase (LpxB)