Gene: AT2G04400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G04400
  • Transcript Identifier AT2G04400.1
  • Gene Type Coding gene
  • Location Chr2 : 1531208-1533578 : positive

Gene Family Information

  • ID HOM05D003366
  • #Genes/#Species 203/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G04400.1
  • uniprot P49572

Descriptions

  • Description Aldolase-type TIM barrel family protein
  • Computational description Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, copper ion binding; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G48220.1); Has 8050 Blast hits to 8050 proteins in 2237 species: Archae - 197; Bacteria - 5328; Metazoa - 3; Fungi - 164; Plants - 82; Viruses - 0; Other Eukaryotes - 2276 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006568
IEA
GOA Databasetryptophan metabolic process
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0000162
IBA
TAS, IEA
Gene Ontologytryptophan biosynthetic process1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004425
IEA
GOA Databaseindole-3-glycerol-phosphate synthase activity
GO:0004425
IGI
IBA
Gene Ontologyindole-3-glycerol-phosphate synthase activity1 2
GO:0004425
IEA
InterProindole-3-glycerol-phosphate synthase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0005507
IDA
GOA Databasecopper ion binding
GO:0005507
HDA
Gene Ontologycopper ion binding3
GO:0004640
IBA
Gene Ontologyphosphoribosylanthranilate isomerase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma4
GO:0009536
IEA
GOA Databaseplastid
GO:0005829
IDA
GOA Databasecytosol
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISS, ISM
Gene Ontologychloroplast5 6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013798 Indole-3-glycerol phosphate synthase
IPR013785 Aldolase-type TIM barrel
IPR011060 Ribulose-phosphate binding barrel
Mapman id Description
4.1.5.3.4 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase