Gene: AT1G79050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G79050
  • Transcript Identifier AT1G79050.2
  • Gene Type Coding gene
  • Location Chr1 : 29737364-29740140 : negative

Gene Family Information

  • ID HOM05D001412
  • #Genes/#Species 445/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G79050.2
  • symbol RECA1
  • full_name homolog of bacterial RecA
  • uniprot Q39199

Descriptions

  • Description recA DNA recombination family protein
  • Computational description recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19704 Blast hits to 19632 proteins in 5647 species: Archae - 493; Bacteria - 14777; Metazoa - 222; Fungi - 191; Plants - 243; Viruses - 74; Other Eukaryotes - 3704 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006974
IMP
Gene Ontologycellular response to DNA damage stimulus1
GO:0006281
IEA
Gene OntologyDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006259
IEA
GOA DatabaseDNA metabolic process
GO:0006310
IEA
GOA DatabaseDNA recombination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003697
IEA
Gene Ontologysingle-stranded DNA binding
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0008094
IEA
Gene OntologyATPase, acting on DNA

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IEA
GOA Databasechloroplast stroma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR013765 DNA recombination and repair protein RecA
Mapman id Description
13.5.8.1 Cell cycle organisation.organellar DNA replication.genome stability maintenance.recombinase (RecA)