Gene: AT1G76580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G76580
  • Transcript Identifier AT1G76580.1
  • Gene Type Coding gene
  • Location Chr1 : 28734600-28738451 : positive

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G76580.1
  • uniprot Q700C2

Descriptions

  • Description Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
  • Computational description Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 4275 Blast hits to 1172 proteins in 134 species: Archae - 0; Bacteria - 31; Metazoa - 161; Fungi - 128; Plants - 962; Viruses - 0; Other Eukaryotes - 2993 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
Gene OntologyDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding2
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
IEA
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus
GO:0005886
IDA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044817 Squamosa promoter-binding-like protein
IPR036893 SBP domain superfamily
IPR036770 Ankyrin repeat-containing domain superfamily
IPR004333 SBP domain
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)