Gene: AT1G75840
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G75840
- Transcript Identifier AT1G75840.1
- Gene Type Coding gene
- Location Chr1 : 28475964-28477377 : positive
Gene Family Information
- ID HOM05D000441
- #Genes/#Species 1176/98
- Phylogenetic origin
- ID ORTHO05D000340
- #Genes/#Species 1085/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G75840.1
- symbol ARAC5
- Alias ATGP3,ARABIDOPSIS THALIANA GERANYLGERANYLATED PROTEIN 3,ATROP4,RHO-LIKE GTP BINDING PROTEIN 4,ROP4,RHO-LIKE GTP BINDING PROTEIN 4
- uniprot Q38937
Descriptions
- Description RAC-like GTP binding protein 5
- Computational description RAC-like GTP binding protein 5 (ARAC5); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1); Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9; Bacteria - 69; Metazoa - 12688; Fungi - 3833; Plants - 2700; Viruses - 20; Other Eukaryotes - 5313 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008360 | IBA | Gene Ontology | regulation of cell shape | 1 |
GO:0007163 | IBA | Gene Ontology | establishment or maintenance of cell polarity | 1 |
GO:0007015 | IBA | Gene Ontology | actin filament organization | 1 |
GO:0007264 | IEA | Gene Ontology | small GTPase mediated signal transduction | |
GO:0007264 | IEA | InterPro | small GTPase mediated signal transduction | |
GO:0009860 | IMP | Gene Ontology | pollen tube growth | 2 |
GO:0048766 | IMP | Gene Ontology | root hair initiation | 3 |
GO:0048767 | IMP | Gene Ontology | root hair elongation | 3 |
GO:0030865 | IBA | Gene Ontology | cortical cytoskeleton organization | 1 |
GO:0032956 | IBA | Gene Ontology | regulation of actin cytoskeleton organization | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0019901 | IPI IBA | Gene Ontology | protein kinase binding | 1 4 |
GO:0005525 | IEA | GOA Database | GTP binding | |
GO:0005525 | IDA IBA TAS | Gene Ontology | GTP binding | 1 5 6 |
GO:0005525 | IEA | InterPro | GTP binding | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0003924 | IEA | GOA Database | GTPase activity | |
GO:0003924 | ISS, IBA | Gene Ontology | GTPase activity | 1 2 |
GO:0003924 | IEA | InterPro | GTPase activity | |
GO:0005515 | IPI | Gene Ontology | protein binding | 7 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | IEA | GOA Database | plasma membrane | |
GO:0005886 | IDA IBA | Gene Ontology | plasma membrane | 1 2 |
GO:0042995 | IBA | Gene Ontology | cell projection | 1 |
GO:0005856 | IBA | Gene Ontology | cytoskeleton | 1 |
GO:0031410 | IBA | Gene Ontology | cytoplasmic vesicle | 1 |
GO:0005634 | IDA | GOA Database | nucleus | |
GO:0005634 | HDA IBA | Gene Ontology | nucleus | 1 8 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | IDA, HDA | Gene Ontology | cytoplasm | 4 8 |
GO:0005730 | IDA | GOA Database | nucleolus | |
GO:0005730 | HDA | Gene Ontology | nucleolus | 8 |
GO:0009524 | IDA | GOA Database | phragmoplast | |
GO:0009524 | HDA | Gene Ontology | phragmoplast | 8 |
GO:0005739 | HDA | Gene Ontology | mitochondrion | 9 |
GO:0005938 | IBA | Gene Ontology | cell cortex | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
27.4.1 | Multi-process regulation.Rop-GTPase regulatory system.small GTPase (ROP) |