Gene: AT1G72870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G72870
- Transcript Identifier AT1G72870.1
- Gene Type Coding gene
- Location Chr1 : 27421086-27422999 : positive
Gene Family Information
- ID HOM05D000005
- #Genes/#Species 11550/84
- Phylogenetic origin
- ID ORTHO05D016622
- #Genes/#Species 10/5
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G72870.1
- uniprot Q9SSN9
Descriptions
- Description Disease resistance protein (TIR-NBS class)
- Computational description Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sperm cell, root; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS class) (TAIR:AT5G48780.2); Has 7950 Blast hits to 7386 proteins in 227 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7937; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0007165 | IEA | GOA Database | signal transduction | |
| GO:0007165 | IEA | InterPro | signal transduction |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0003953 | IEA | GOA Database | NAD+ nucleosidase activity | |
| GO:0003953 | IEA | InterPro | NAD+ nucleosidase activity | |
| GO:0043531 | IEA | GOA Database | ADP binding | |
| GO:0043531 | IEA | InterPro | ADP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR042197 | Apoptotic protease-activating factors, helical domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR002182 | NB-ARC |
| IPR044974 | Disease resistance protein, plants |
| IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |