Gene: AT1G72350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G72350
  • Transcript Identifier AT1G72350.1
  • Gene Type Coding gene
  • Location Chr1 : 27239273-27239947 : negative

Gene Family Information

  • ID HOM05D000203
  • #Genes/#Species 1948/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G72350.1
  • uniprot Q9C9D4

Descriptions

  • Description MADS-box transcription factor family protein
  • Computational description MADS-box transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT1G17310.1); Has 5540 Blast hits to 5540 proteins in 663 species: Archae - 0; Bacteria - 0; Metazoa - 627; Fungi - 301; Plants - 4544; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
Gene Ontologypositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific2
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000977
IEA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
IPR033896 MADS MEF2-like
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)